Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane transport energization protein exbb | SAMN04488090_3718 | Not Available | Negative | 4594088 - 4594768 | 23974.6 |
| hypothetical protein | SAMN04488090_3719 | Not Available | Positive | 4594959 - 4595729 | 30091.3 |
| zinc protease | SAMN04488090_3720 | Not Available | Positive | 4595830 - 4598634 | 104629.0 |
| mfs transporter, acs family, hexuronate transporter | SAMN04488090_3721 | Not Available | Positive | 4599004 - 4600332 | 48597.6 |
| gdsl-like lipase/acylhydrolase family protein | SAMN04488090_3722 | Not Available | Positive | 4600369 - 4601067 | 26801.1 |
| glycerate dehydrogenase | SAMN04488090_3723 | Not Available | Positive | 4601076 - 4602038 | 34798.6 |
| predicted transcriptional regulator | SAMN04488090_3724 | Not Available | Positive | 4602121 - 4602474 | 13511.1 |
| tonb-dependent outer membrane receptor, susc/raga subfamily, signature region | SAMN04488090_3725 | Not Available | Positive | 4602471 - 4603754 | 48691.1 |
| iron complex outermembrane recepter protein | SAMN04488090_3726 | Not Available | Positive | 4603904 - 4606255 | 85124.6 |
| uncharacterized iron-regulated membrane protein | SAMN04488090_3727 | Not Available | Positive | 4606342 - 4607451 | 42573.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
