Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_3708 | Not Available | Negative | 4583923 - 4584348 | 15615.7 |
| hypothetical protein | SAMN04488090_3709 | Not Available | Negative | 4584352 - 4584660 | 11186.6 |
| hypothetical protein | SAMN04488090_3710 | Not Available | Negative | 4584797 - 4586263 | 55198.4 |
| phosphoenolpyruvate carboxykinase (atp) | SAMN04488090_3711 | Not Available | Positive | 4586397 - 4588052 | 60131.6 |
| d-fructose 1,6-bisphosphatase | SAMN04488090_3712 | Not Available | Positive | 4588012 - 4589055 | 38065.5 |
| pyruvate kinase | SAMN04488090_3713 | Not Available | Negative | 4589120 - 4590631 | 54945.2 |
| hypothetical protein | SAMN04488090_3714 | Not Available | Positive | 4590764 - 4590916 | 5584.67 |
| azurin | SAMN04488090_3715 | Not Available | Positive | 4590955 - 4591986 | 38043.8 |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN04488090_3716 | Not Available | Positive | 4591983 - 4593452 | 53812.7 |
| biopolymer transport protein exbd | SAMN04488090_3717 | Not Available | Negative | 4593653 - 4594057 | 14473.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
