Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_0362 | Not Available | Negative | 486549 - 486983 | 15839.9 |
| hypothetical protein | SAMN04488090_0363 | Not Available | Negative | 487114 - 487272 | 5947.94 |
| hypothetical protein | SAMN04488090_0364 | Not Available | Negative | 487220 - 488398 | 44120.7 |
| toxin syme, type i toxin-antitoxin system | SAMN04488090_0365 | Not Available | Negative | 489601 - 489801 | 7616.38 |
| helix-turn-helix domain-containing protein | SAMN04488090_0366 | Not Available | Positive | 489965 - 490372 | 15894.1 |
| hypothetical protein | SAMN04488090_0367 | Not Available | Positive | 490400 - 491407 | 38891.1 |
| predicted nucleotide-binding protein containing tir-like domain-containing protein | SAMN04488090_0368 | Not Available | Positive | 491409 - 492365 | 36227.7 |
| cation diffusion facilitator family transporter | SAMN04488090_0369 | Not Available | Negative | 492422 - 493339 | 34465.2 |
| cna protein b-type domain-containing protein | SAMN04488090_0370 | Not Available | Negative | 493454 - 496327 | 101147.0 |
| hypothetical protein | SAMN04488090_0371 | Not Available | Negative | 497140 - 500028 | 101111.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
