Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | SAMN04488090_3698 | Not Available | Positive | 4572565 - 4573449 | 31252.1 |
| arac-type dna-binding protein | SAMN04488090_3699 | Not Available | Positive | 4573442 - 4574290 | 33063.5 |
| uroporphyrinogen decarboxylase | SAMN04488090_3700 | Not Available | Negative | 4574328 - 4575353 | 38233.4 |
| gtp-binding protein | SAMN04488090_3701 | Not Available | Positive | 4575477 - 4576088 | 23225.0 |
| hypothetical protein | SAMN04488090_3702 | Not Available | Positive | 4576199 - 4576630 | 16045.1 |
| protein of unknown function, duf393 | SAMN04488090_3703 | Not Available | Negative | 4576787 - 4577461 | 24785.5 |
| dna-binding transcriptional regulator gbsr, marr family | SAMN04488090_3704 | Not Available | Negative | 4577538 - 4578038 | 19175.2 |
| cobalt-zinc-cadmium resistance protein czca | SAMN04488090_3705 | Not Available | Negative | 4578116 - 4581232 | 114048.0 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | SAMN04488090_3706 | Not Available | Negative | 4581240 - 4582313 | 39842.3 |
| outer membrane protein, cobalt-zinc-cadmium efflux system | SAMN04488090_3707 | Not Available | Negative | 4582313 - 4583623 | 49019.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
