Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase | SAMN04488090_3688 | Not Available | Positive | 4561123 - 4562151 | 37721.7 |
| protein n-acetyltransferase, rimj/riml family | SAMN04488090_3689 | Not Available | Positive | 4562200 - 4562706 | 18603.1 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN04488090_3690 | Not Available | Positive | 4562703 - 4563542 | 31758.7 |
| regulatory protein, luxr family | SAMN04488090_3691 | Not Available | Negative | 4563539 - 4564657 | 43562.2 |
| magnesium transporter | SAMN04488090_3692 | Not Available | Positive | 4565287 - 4566234 | 36699.3 |
| putative membrane-bound dehydrogenase domain-containing protein | SAMN04488090_3693 | Not Available | Positive | 4566373 - 4569444 | 112435.0 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488090_3694 | Not Available | Positive | 4569577 - 4570278 | 26110.4 |
| outer membrane protein beta-barrel domain-containing protein | SAMN04488090_3695 | Not Available | Positive | 4570291 - 4570914 | 22944.9 |
| rfae bifunctional protein, domain i | SAMN04488090_3696 | Not Available | Positive | 4570959 - 4571933 | 35328.8 |
| n-acetylglutamate synthase, gnat family | SAMN04488090_3697 | Not Available | Positive | 4571936 - 4572364 | 16230.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
