Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_3678 | Not Available | Negative | 4551895 - 4552587 | 25980.4 |
| aspartyl protease | SAMN04488090_3679 | Not Available | Negative | 4552680 - 4553927 | 46364.0 |
| triosephosphate isomerase | SAMN04488090_3680 | Not Available | Positive | 4554144 - 4554902 | 27033.3 |
| hypothetical protein | SAMN04488090_3681 | Not Available | Positive | 4555199 - 4556779 | 59868.2 |
| dinb superfamily protein | SAMN04488090_3682 | Not Available | Negative | 4556811 - 4557278 | 17345.8 |
| ycii-related domain-containing protein | SAMN04488090_3683 | Not Available | Negative | 4557275 - 4557616 | 12870.2 |
| hypothetical protein | SAMN04488090_3684 | Not Available | Negative | 4557819 - 4558316 | 18322.0 |
| uncharacterized protein, contains sis (sugar isomerase) phosphosugar binding domain | SAMN04488090_3685 | Not Available | Negative | 4558524 - 4559306 | 27944.5 |
| glucokinase | SAMN04488090_3686 | Not Available | Negative | 4559318 - 4560208 | 31448.6 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN04488090_3687 | Not Available | Negative | 4560229 - 4561023 | 27911.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
