Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase | SAMN04488090_3667 | Not Available | Negative | 4538868 - 4540802 | 74891.4 |
| fe(3+) dicitrate transport protein | SAMN04488090_3668 | Not Available | Negative | 4540901 - 4543291 | 88356.5 |
| protein of unknown function | SAMN04488090_3669 | Not Available | Negative | 4543295 - 4544431 | 42236.7 |
| pap2 superfamily protein | SAMN04488090_3670 | Not Available | Negative | 4544438 - 4545979 | 55709.0 |
| hypothetical protein | SAMN04488090_3671 | Not Available | Negative | 4545998 - 4546954 | 34943.9 |
| na+/proline symporter | SAMN04488090_3672 | Not Available | Negative | 4547260 - 4548711 | 54220.2 |
| atp-dependent clp protease adaptor protein clps | SAMN04488090_3673 | Not Available | Positive | 4548922 - 4549215 | 10995.1 |
| dna replication and repair protein recr | SAMN04488090_3674 | Not Available | Positive | 4549240 - 4549848 | 22495.2 |
| predicted metal-dependent hydrolase, tim-barrel fold | SAMN04488090_3676 | Not Available | Negative | 4550212 - 4551327 | 42806.7 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SAMN04488090_3677 | Not Available | Negative | 4551345 - 4551827 | 17708.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
