Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septum formation protein | SAMN04488090_3657 | Not Available | Positive | 4527289 - 4527870 | 21785.2 |
| monofunctional biosynthetic peptidoglycan transglycosylase | SAMN04488090_3658 | Not Available | Negative | 4527908 - 4528606 | 26192.8 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN04488090_3659 | Not Available | Negative | 4528764 - 4529897 | 42664.2 |
| methyltransferase domain-containing protein | SAMN04488090_3660 | Not Available | Negative | 4529913 - 4530683 | 29480.3 |
| gwxtd domain-containing protein | SAMN04488090_3661 | Not Available | Positive | 4530911 - 4532179 | 48192.1 |
| 23s rrna (guanosine2251-2'-o)-methyltransferase | SAMN04488090_3662 | Not Available | Positive | 4532155 - 4532970 | 29422.8 |
| rna polymerase sigma factor, sigma-70 family | SAMN04488090_3663 | Not Available | Positive | 4533190 - 4533792 | 23747.5 |
| hypothetical protein | SAMN04488090_3664 | Not Available | Positive | 4533782 - 4534510 | 28277.2 |
| chat domain-containing protein | SAMN04488090_3665 | Not Available | Negative | 4534718 - 4537567 | 107758.0 |
| hypothetical protein | SAMN04488090_3666 | Not Available | Positive | 4538189 - 4538875 | 25872.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
