Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase | SAMN04488090_3607 | Not Available | Positive | 4459807 - 4461027 | 43939.5 |
| gntr family transcriptional regulator / mocr family aminotransferase | SAMN04488090_3608 | Not Available | Negative | 4461089 - 4462522 | 52926.2 |
| hypothetical protein | SAMN04488090_3609 | Not Available | Positive | 4462628 - 4463281 | 24065.9 |
| uncharacterized protein yxji | SAMN04488090_3610 | Not Available | Positive | 4463380 - 4463985 | 23028.8 |
| hemoglobin | SAMN04488090_3611 | Not Available | Negative | 4464110 - 4464517 | 16109.0 |
| stearoyl-coa desaturase (delta-9 desaturase) | SAMN04488090_3612 | Not Available | Negative | 4464571 - 4465317 | 29560.6 |
| cu+-exporting atpase | SAMN04488090_3613 | Not Available | Negative | 4465343 - 4467721 | 88047.1 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488090_3614 | Not Available | Positive | 4467904 - 4468611 | 26318.8 |
| cyclic nucleotide-binding domain-containing protein | SAMN04488090_3615 | Not Available | Positive | 4468779 - 4469144 | 14178.1 |
| uracil-dna glycosylase | SAMN04488090_3616 | Not Available | Negative | 4469321 - 4469986 | 25006.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
