Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_0352 | Not Available | Negative | 471355 - 471537 | 6945.99 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_0353 | Not Available | Positive | 471595 - 474915 | 116174.0 |
| cu2+-exporting atpase | SAMN04488090_0354 | Not Available | Negative | 475048 - 477015 | 69935.2 |
| hypothetical protein | SAMN04488090_0355 | Not Available | Positive | 477115 - 477396 | 10492.9 |
| two component transcriptional regulator, lyttr family | SAMN04488090_0356 | Not Available | Negative | 477674 - 478384 | 26911.8 |
| histidine kinase | SAMN04488090_0357 | Not Available | Negative | 478362 - 479492 | 43626.6 |
| outer membrane receptor proteins, mostly fe transport | SAMN04488090_0358 | Not Available | Positive | 479753 - 482206 | 89560.0 |
| putative membrane protein | SAMN04488090_0359 | Not Available | Positive | 482296 - 483219 | 35090.8 |
| n-terminal ig-like domain of cellulase | SAMN04488090_0360 | Not Available | Positive | 483361 - 485301 | 72638.3 |
| alpha/beta hydrolase family protein | SAMN04488090_0361 | Not Available | Negative | 485733 - 486413 | 25693.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
