Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dimerisation domain-containing protein | SAMN04488090_3597 | Not Available | Negative | 4447865 - 4448902 | 37830.2 |
| histidine kinase | SAMN04488090_3598 | Not Available | Positive | 4449037 - 4450041 | 37855.1 |
| two component transcriptional regulator, lyttr family | SAMN04488090_3599 | Not Available | Positive | 4450038 - 4450730 | 26421.1 |
| dioxygenase | SAMN04488090_3600 | Not Available | Positive | 4450840 - 4451577 | 26085.3 |
| hypothetical protein | SAMN04488090_3601 | Not Available | Positive | 4451639 - 4452151 | 19784.4 |
| hypothetical protein | SAMN04488090_3602 | Not Available | Positive | 4452148 - 4452798 | 23810.2 |
| predicted acyltransferase | SAMN04488090_3603 | Not Available | Negative | 4452795 - 4453988 | 44457.8 |
| permease of the drug/metabolite transporter (dmt) superfamily | SAMN04488090_3604 | Not Available | Positive | 4454218 - 4455108 | 32164.2 |
| tricorn protease | SAMN04488090_3605 | Not Available | Negative | 4455201 - 4458569 | 124279.0 |
| putative membrane protein | SAMN04488090_3606 | Not Available | Positive | 4458711 - 4459589 | 33163.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
