Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitroreductase | SAMN04488090_3586 | Not Available | Negative | 4437517 - 4438104 | 21606.6 |
| lysozyme | SAMN04488090_3587 | Not Available | Negative | 4438150 - 4438929 | 29542.1 |
| alkyl hydroperoxide reductase subunit ahpc (peroxiredoxin) | SAMN04488090_3588 | Not Available | Negative | 4439066 - 4439701 | 23361.8 |
| Trna-ala | Not Available | Not Available | Positive | 4439935 - 4440008 | Not Available |
| hypothetical protein | SAMN04488090_3590 | Not Available | Positive | 4440274 - 4440647 | 13522.8 |
| transposase | SAMN04488090_3591 | Not Available | Positive | 4440691 - 4441224 | 20864.3 |
| hypothetical protein | SAMN04488090_3593 | Not Available | Negative | 4442115 - 4443506 | 52194.1 |
| sugar phosphate isomerase/epimerase | SAMN04488090_3594 | Not Available | Positive | 4443798 - 4444631 | 30684.2 |
| hypothetical protein | SAMN04488090_3595 | Not Available | Positive | 4444744 - 4446714 | 73072.1 |
| luciferase family oxidoreductase, group 1 | SAMN04488090_3596 | Not Available | Positive | 4446750 - 4447742 | 36730.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
