Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xaa-pro aminopeptidase | SAMN04488090_3576 | Not Available | Negative | 4428428 - 4429717 | 49403.0 |
| methyltransferase domain-containing protein | SAMN04488090_3577 | Not Available | Negative | 4429766 - 4430530 | 30052.5 |
| protein of unknown function | SAMN04488090_3578 | Not Available | Negative | 4430676 - 4431452 | 28583.9 |
| hypothetical protein | SAMN04488090_3579 | Not Available | Positive | 4431674 - 4432066 | 15000.9 |
| hypothetical protein | SAMN04488090_3580 | Not Available | Negative | 4432107 - 4432253 | 5493.91 |
| hypothetical protein | SAMN04488090_3581 | Not Available | Negative | 4432288 - 4432536 | 9119.02 |
| histidyl-trna synthetase | SAMN04488090_3582 | Not Available | Positive | 4432540 - 4433907 | 50852.5 |
| hypothetical protein | SAMN04488090_3583 | Not Available | Negative | 4433904 - 4434686 | 28752.6 |
| hypothetical protein | SAMN04488090_3584 | Not Available | Negative | 4434762 - 4435607 | 31533.2 |
| glucose-6-phosphate isomerase | SAMN04488090_3585 | Not Available | Negative | 4435748 - 4437394 | 61211.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
