Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid-a-disaccharide synthase | SAMN04488090_3566 | Not Available | Positive | 4418917 - 4420014 | 41228.0 |
| hypothetical protein | SAMN04488090_3567 | Not Available | Negative | 4420122 - 4420517 | 14405.5 |
| polyketide cyclase / dehydrase and lipid transport | SAMN04488090_3568 | Not Available | Negative | 4420539 - 4421084 | 20394.6 |
| acyltransferase | SAMN04488090_3569 | Not Available | Negative | 4421227 - 4421787 | 21390.9 |
| peptidase family m50 | SAMN04488090_3570 | Not Available | Negative | 4421851 - 4422999 | 42742.6 |
| putative hydrolase of the had superfamily | SAMN04488090_3571 | Not Available | Negative | 4423027 - 4423635 | 23051.6 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | SAMN04488090_3572 | Not Available | Negative | 4423640 - 4424593 | 35492.9 |
| metallo-beta-lactamase family protein | SAMN04488090_3573 | Not Available | Negative | 4424695 - 4426113 | 53528.1 |
| d-alanyl-d-alanine carboxypeptidase / d-alanyl-d-alanine-endopeptidase (penicillin-binding protein 4) | SAMN04488090_3574 | Not Available | Positive | 4426344 - 4427807 | 52589.1 |
| uncharacterized membrane protein | SAMN04488090_3575 | Not Available | Positive | 4427812 - 4428306 | 19134.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
