Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_3556 | Not Available | Negative | 4406659 - 4408527 | 70291.6 |
| hypothetical protein | SAMN04488090_3557 | Not Available | Negative | 4408778 - 4409272 | 18721.5 |
| gtp-binding protein lepa | SAMN04488090_3558 | Not Available | Positive | 4409345 - 4411321 | 74271.8 |
| linoleoyl-coa desaturase | SAMN04488090_3559 | Not Available | Positive | 4411522 - 4412658 | 43827.0 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | SAMN04488090_3560 | Not Available | Positive | 4412838 - 4414478 | 57031.3 |
| atp dependent peptidase codwx, codw component. threonine peptidase. merops family t01b | SAMN04488090_3561 | Not Available | Positive | 4414640 - 4415179 | 19088.0 |
| hypothetical protein | SAMN04488090_3562 | Not Available | Positive | 4415231 - 4415611 | 14190.8 |
| carboxynorspermidine decarboxylase | SAMN04488090_3563 | Not Available | Negative | 4415677 - 4416810 | 42240.4 |
| adp-glyceromanno-heptose 6-epimerase precursor | SAMN04488090_3564 | Not Available | Negative | 4417172 - 4418137 | 37473.3 |
| 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase | SAMN04488090_3565 | Not Available | Positive | 4418458 - 4418880 | 16205.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
