Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kdo2-lipid iv(a) lauroyltransferase | SAMN04488090_3526 | Not Available | Negative | 4370040 - 4370906 | 34602.1 |
| wbqc-like protein family protein | SAMN04488090_3527 | Not Available | Positive | 4371023 - 4371691 | 26256.3 |
| atp-dependent clp protease atp-binding subunit clpc | SAMN04488090_3528 | Not Available | Positive | 4371780 - 4374302 | 93860.1 |
| uncharacterized conserved protein, duf3820 family | SAMN04488090_3529 | Not Available | Positive | 4374378 - 4374710 | 12596.5 |
| hypothetical protein | SAMN04488090_3530 | Not Available | Negative | 4374658 - 4375128 | 17520.1 |
| hypothetical protein | SAMN04488090_3531 | Not Available | Negative | 4375241 - 4377088 | 69427.9 |
| hypothetical protein | SAMN04488090_3532 | Not Available | Negative | 4377134 - 4378996 | 71031.7 |
| atp phosphoribosyltransferase | SAMN04488090_3533 | Not Available | Positive | 4379180 - 4380103 | 33139.2 |
| histidinol dehydrogenase | SAMN04488090_3534 | Not Available | Positive | 4380197 - 4381468 | 45637.6 |
| histidinol phosphate aminotransferase apoenzyme | SAMN04488090_3535 | Not Available | Positive | 4381546 - 4382601 | 39203.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
