Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_3506 | Not Available | Positive | 4348860 - 4349456 | 22250.2 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMN04488090_3507 | Not Available | Positive | 4349544 - 4350788 | 45395.6 |
| glutamate synthase domain-containing protein 2 | SAMN04488090_3508 | Not Available | Positive | 4350887 - 4352461 | 57423.0 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN04488090_3509 | Not Available | Positive | 4352598 - 4353179 | 22468.0 |
| putative mfs transporter, agza family, xanthine/uracil permease | SAMN04488090_3510 | Not Available | Positive | 4353216 - 4354514 | 45895.6 |
| adenosylhomocysteine nucleosidase | SAMN04488090_3511 | Not Available | Positive | 4354511 - 4355335 | 29746.3 |
| malate dehydrogenase (nad) | SAMN04488090_3512 | Not Available | Positive | 4355406 - 4356485 | 38633.3 |
| upf0755 protein | SAMN04488090_3513 | Not Available | Positive | 4356497 - 4357537 | 39857.1 |
| acyl-coa thioester hydrolase | SAMN04488090_3514 | Not Available | Positive | 4357539 - 4357958 | 16103.5 |
| membrane protein | SAMN04488090_3515 | Not Available | Positive | 4357991 - 4358929 | 35501.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
