Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-polyprenyl-6-methoxyphenol hydroxylase | SAMN04488090_0340 | Not Available | Positive | 456469 - 457680 | 44428.2 |
| short-chain dehydrogenase | SAMN04488090_0343 | Not Available | Positive | 458660 - 459598 | 34430.1 |
| uncharacterized conserved protein glcg, duf336 family | SAMN04488090_0344 | Not Available | Positive | 459660 - 460061 | 13030.5 |
| arac-type dna-binding protein | SAMN04488090_0345 | Not Available | Positive | 460070 - 460909 | 32661.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_0346 | Not Available | Positive | 461147 - 461737 | 23137.5 |
| fecr family protein | SAMN04488090_0347 | Not Available | Positive | 461837 - 462940 | 41238.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_0348 | Not Available | Positive | 463169 - 466564 | 122065.0 |
| starch-binding associating with outer membrane | SAMN04488090_0349 | Not Available | Positive | 466592 - 468025 | 52947.5 |
| fad dependent oxidoreductase | SAMN04488090_0350 | Not Available | Positive | 468076 - 469662 | 58792.8 |
| beta-lactamase class a | SAMN04488090_0351 | Not Available | Positive | 469863 - 470756 | 32666.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
