Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclic pyranopterin monophosphate synthase subunit moac | SAMN04488090_3496 | Not Available | Positive | 4339583 - 4340053 | 16456.1 |
| molybdenum cofactor guanylyltransferase | SAMN04488090_3497 | Not Available | Positive | 4340066 - 4340644 | 21296.6 |
| mscs family membrane protein | SAMN04488090_3498 | Not Available | Positive | 4340675 - 4341841 | 43545.8 |
| transcription termination factor rho | SAMN04488090_3499 | Not Available | Positive | 4342107 - 4343942 | 68002.1 |
| ompa-ompf porin, oop family | SAMN04488090_3500 | Not Available | Positive | 4344119 - 4345087 | 35015.6 |
| predicted 5' dna nuclease, flap endonuclease-1-like, helix-3-turn-helix (h3th) domain | SAMN04488090_3501 | Not Available | Positive | 4345110 - 4345628 | 19166.2 |
| predicted 5' dna nuclease, flap endonuclease-1-like, helix-3-turn-helix (h3th) domain | SAMN04488090_3502 | Not Available | Positive | 4345638 - 4346207 | 20646.0 |
| uncharacterized conserved protein ytfp, gamma-glutamylcyclotransferase (ggct)/aig2-like family | SAMN04488090_3503 | Not Available | Negative | 4346417 - 4346851 | 16366.3 |
| putative aminopeptidase frvx | SAMN04488090_3504 | Not Available | Positive | 4346940 - 4348007 | 39596.0 |
| uncharacterized membrane protein | SAMN04488090_3505 | Not Available | Positive | 4348156 - 4348740 | 21591.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
