Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sh3 domain-containing protein | SAMN04488090_3486 | Not Available | Negative | 4327191 - 4328327 | 42009.0 |
| beta-lactamase enzyme family protein | SAMN04488090_3487 | Not Available | Negative | 4328332 - 4329570 | 47619.1 |
| 7-keto-8-aminopelargonate synthetase | SAMN04488090_3488 | Not Available | Negative | 4329567 - 4330628 | 38261.7 |
| l-alanine-dl-glutamate epimerase | SAMN04488090_3489 | Not Available | Negative | 4330625 - 4331677 | 39256.4 |
| uncharacterized conserved protein yafd, endonuclease/exonuclease/phosphatase (eep) superfamily | SAMN04488090_3490 | Not Available | Positive | 4331896 - 4332855 | 35653.3 |
| hypothetical protein | SAMN04488090_3491 | Not Available | Negative | 4332930 - 4333622 | 24877.3 |
| mannobiose 2-epimerase | SAMN04488090_3492 | Not Available | Negative | 4334221 - 4335408 | 46393.8 |
| molybdopterin molybdochelatase | SAMN04488090_3493 | Not Available | Negative | 4335421 - 4336608 | 42954.6 |
| dipeptidyl-peptidase-4 | SAMN04488090_3494 | Not Available | Positive | 4336736 - 4338949 | 82209.5 |
| predicted o-methyltransferase yrrm | SAMN04488090_3495 | Not Available | Positive | 4339006 - 4339578 | 20762.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
