Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nte family protein | SAMN04488090_3436 | Not Available | Positive | 4280141 - 4281082 | 34216.3 |
| cysteine desulfurase | SAMN04488090_3437 | Not Available | Positive | 4281173 - 4282315 | 41505.5 |
| outer membrane protein tolc | SAMN04488090_3438 | Not Available | Positive | 4282522 - 4283913 | 51547.8 |
| multidrug efflux pump subunit acrb | SAMN04488090_3439 | Not Available | Positive | 4283929 - 4287159 | 117407.0 |
| rnd family efflux transporter, mfp subunit | SAMN04488090_3440 | Not Available | Positive | 4287156 - 4288292 | 41420.0 |
| hypothetical protein | SAMN04488090_3441 | Not Available | Positive | 4288298 - 4288810 | 19335.1 |
| hypothetical protein | SAMN04488090_3442 | Not Available | Negative | 4288946 - 4290520 | 57550.6 |
| hypothetical protein | SAMN04488090_3443 | Not Available | Negative | 4290705 - 4291238 | 19616.2 |
| uncharacterized membrane protein | SAMN04488090_3444 | Not Available | Negative | 4291534 - 4292151 | 23601.0 |
| hypothetical protein | SAMN04488090_3445 | Not Available | Negative | 4292165 - 4292806 | 24415.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
