Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_3426 | Not Available | Positive | 4265785 - 4266006 | 8606.04 |
| phosphatidate cytidylyltransferase | SAMN04488090_3427 | Not Available | Positive | 4265921 - 4266817 | 33469.3 |
| hypothetical protein | SAMN04488090_3428 | Not Available | Positive | 4266817 - 4267332 | 19847.0 |
| spheroidene monooxygenase | SAMN04488090_3429 | Not Available | Positive | 4267339 - 4267989 | 24734.4 |
| histidine kinase | SAMN04488090_3430 | Not Available | Positive | 4268172 - 4269236 | 41167.5 |
| two component transcriptional regulator, lyttr family | SAMN04488090_3431 | Not Available | Positive | 4269276 - 4270025 | 28835.7 |
| aldose 1-epimerase | SAMN04488090_3432 | Not Available | Positive | 4270028 - 4270972 | 34990.9 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_3433 | Not Available | Negative | 4271039 - 4272730 | 62647.7 |
| carboxypeptidase regulatory-like domain-containing protein | SAMN04488090_3434 | Not Available | Negative | 4272886 - 4276254 | 121956.0 |
| carboxypeptidase regulatory-like domain-containing protein | SAMN04488090_3435 | Not Available | Negative | 4276397 - 4279663 | 118761.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
