Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pimeloyl-acp methyl ester carboxylesterase | SAMN04488090_3406 | Not Available | Negative | 4247139 - 4248068 | 34986.4 |
| octaprenyl-diphosphate synthase | SAMN04488090_3407 | Not Available | Positive | 4248107 - 4249081 | 36845.0 |
| protein of unknown function | SAMN04488090_3408 | Not Available | Negative | 4249197 - 4249772 | 20517.8 |
| osmotically inducible protein osmc | SAMN04488090_3409 | Not Available | Positive | 4249965 - 4250384 | 14256.8 |
| hypothetical protein | SAMN04488090_3410 | Not Available | Positive | 4250460 - 4251599 | 43077.3 |
| hypothetical protein | SAMN04488090_3411 | Not Available | Positive | 4251657 - 4252205 | 21252.7 |
| hypothetical protein | SAMN04488090_3412 | Not Available | Negative | 4252278 - 4252400 | 4592.47 |
| exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | SAMN04488090_3413 | Not Available | Negative | 4252358 - 4253269 | 33994.1 |
| 4-amino-4-deoxy-l-arabinose transferase | SAMN04488090_3414 | Not Available | Negative | 4253341 - 4254972 | 60713.7 |
| hypothetical protein | SAMN04488090_3415 | Not Available | Negative | 4255029 - 4255913 | 32466.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
