Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | SAMN04488090_0330 | Not Available | Positive | 435659 - 439810 | 155025.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN04488090_0331 | Not Available | Positive | 440103 - 443243 | 114056.0 |
| starch-binding associating with outer membrane | SAMN04488090_0332 | Not Available | Positive | 443294 - 444880 | 58238.6 |
| hypothetical protein | SAMN04488090_0333 | Not Available | Positive | 444893 - 445570 | 23969.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_0334 | Not Available | Positive | 445660 - 448629 | 104611.0 |
| beta-glucuronidase | SAMN04488090_0335 | Not Available | Negative | 448744 - 450774 | 76588.4 |
| hypothetical protein | SAMN04488090_0336 | Not Available | Positive | 451602 - 452786 | 44420.7 |
| transcriptional regulator, arac family | SAMN04488090_0337 | Not Available | Positive | 452926 - 453786 | 32646.9 |
| major facilitator superfamily protein | SAMN04488090_0338 | Not Available | Positive | 454262 - 455638 | 47559.9 |
| catechol 2,3-dioxygenase | SAMN04488090_0339 | Not Available | Positive | 455822 - 456214 | 15127.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
