Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxymethylglutaryl-coa lyase | SAMN04488090_3396 | Not Available | Positive | 4240374 - 4241219 | 30448.7 |
| hypothetical protein | SAMN04488090_3397 | Not Available | Negative | 4241315 - 4241842 | 20014.2 |
| iron-sulfur cluster assembly protein | SAMN04488090_3398 | Not Available | Positive | 4241964 - 4242251 | 10677.8 |
| hnh endonuclease | SAMN04488090_3399 | Not Available | Negative | 4242284 - 4242847 | 22292.7 |
| hypothetical protein | SAMN04488090_3400 | Not Available | Positive | 4243057 - 4243413 | 12922.6 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN04488090_3401 | Not Available | Negative | 4243540 - 4244541 | 36555.2 |
| phosphoribosylformylglycinamidine synthase | SAMN04488090_3402 | Not Available | Negative | 4244753 - 4245004 | 9196.3 |
| cdp-diacylglycerol---serine o-phosphatidyltransferase | SAMN04488090_3403 | Not Available | Negative | 4245051 - 4245761 | 26139.8 |
| glyoxylase, beta-lactamase superfamily ii | SAMN04488090_3404 | Not Available | Negative | 4245767 - 4246423 | 24749.1 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN04488090_3405 | Not Available | Negative | 4246432 - 4247139 | 25811.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
