Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_3386 | Not Available | Negative | 4230998 - 4232197 | 46517.1 |
| Trna-thr | Not Available | Not Available | Positive | 4232456 - 4232531 | Not Available |
| glucose/arabinose dehydrogenase, beta-propeller fold | SAMN04488090_3388 | Not Available | Negative | 4232597 - 4233775 | 43301.5 |
| imidazolonepropionase | SAMN04488090_3389 | Not Available | Positive | 4234004 - 4235272 | 45578.9 |
| doxx-like family protein | SAMN04488090_3390 | Not Available | Negative | 4235395 - 4235775 | 13428.0 |
| transcriptional regulator, hxlr family | SAMN04488090_3391 | Not Available | Positive | 4235843 - 4236247 | 15548.8 |
| head domain of trimeric autotransporter adhesin | SAMN04488090_3392 | Not Available | Positive | 4236460 - 4237596 | 39930.3 |
| Trna-arg | Not Available | Not Available | Positive | 4237673 - 4237744 | Not Available |
| gtp-binding protein hflx | SAMN04488090_3394 | Not Available | Negative | 4237972 - 4239168 | 45655.2 |
| 5,10-methylenetetrahydrofolate reductase (nad(p)) | SAMN04488090_3395 | Not Available | Positive | 4239420 - 4240373 | 35947.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
