Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_3366 | Not Available | Positive | 4208726 - 4208899 | 6368.64 |
| hypothetical protein | SAMN04488090_3367 | Not Available | Positive | 4208886 - 4209212 | 11939.9 |
| hypothetical protein | SAMN04488090_3368 | Not Available | Positive | 4209312 - 4210727 | 51668.6 |
| hypothetical protein | SAMN04488090_3369 | Not Available | Negative | 4210772 - 4212220 | 56701.0 |
| kap family p-loop domain-containing protein | SAMN04488090_3370 | Not Available | Negative | 4212488 - 4214050 | 60998.5 |
| hypothetical protein | SAMN04488090_3371 | Not Available | Positive | 4214170 - 4214805 | 23961.0 |
| hypothetical protein | SAMN04488090_3372 | Not Available | Positive | 4214802 - 4218848 | 148090.0 |
| hypothetical protein | SAMN04488090_3373 | Not Available | Positive | 4218967 - 4219482 | 20109.3 |
| hypothetical protein | SAMN04488090_3374 | Not Available | Positive | 4219568 - 4220215 | 23743.1 |
| hypothetical protein | SAMN04488090_3375 | Not Available | Positive | 4220218 - 4223163 | 107974.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
