Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-s-isoprenylcysteine o-methyltransferase ste14 | SAMN04488090_3356 | Not Available | Positive | 4195248 - 4195907 | 24542.3 |
| caspase domain-containing protein | SAMN04488090_3357 | Not Available | Positive | 4196522 - 4197913 | 51459.3 |
| two component transcriptional regulator, luxr family | SAMN04488090_3358 | Not Available | Positive | 4197918 - 4198595 | 25373.9 |
| signal transduction histidine kinase | SAMN04488090_3359 | Not Available | Positive | 4198592 - 4200364 | 67402.9 |
| peroxiredoxin | SAMN04488090_3360 | Not Available | Positive | 4200532 - 4201659 | 43004.1 |
| peroxiredoxin | SAMN04488090_3361 | Not Available | Positive | 4201715 - 4202860 | 43220.9 |
| hypothetical protein | SAMN04488090_3362 | Not Available | Positive | 4202907 - 4203626 | 26607.8 |
| hypothetical protein | SAMN04488090_3363 | Not Available | Positive | 4204935 - 4205720 | 29101.0 |
| ribosomal protein s18 acetylase rimi | SAMN04488090_3364 | Not Available | Positive | 4206029 - 4206463 | 16072.3 |
| hypothetical protein | SAMN04488090_3365 | Not Available | Positive | 4208376 - 4208627 | 9362.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
