Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, lyttr family | SAMN04488090_3326 | Not Available | Positive | 4159771 - 4160526 | 29027.6 |
| two-component sensor histidine kinase, contains hiska and hatpase domains | SAMN04488090_3327 | Not Available | Positive | 4160544 - 4162355 | 69356.9 |
| uncharacterized conserved protein ybbc, duf1343 family | SAMN04488090_3328 | Not Available | Negative | 4162346 - 4163464 | 40461.5 |
| predicted arabinose efflux permease, mfs family | SAMN04488090_3329 | Not Available | Negative | 4163557 - 4165020 | 53073.7 |
| hypothetical protein | SAMN04488090_3330 | Not Available | Positive | 4165118 - 4166341 | 45351.3 |
| hypothetical protein | SAMN04488090_3331 | Not Available | Positive | 4166417 - 4167094 | 25645.5 |
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN04488090_3332 | Not Available | Negative | 4167164 - 4168081 | 31784.5 |
| alanine racemase | SAMN04488090_3333 | Not Available | Negative | 4168276 - 4170624 | 88175.8 |
| magnesium transporter | SAMN04488090_3334 | Not Available | Negative | 4170696 - 4171772 | 41233.2 |
| predicted dehydrogenase | SAMN04488090_3335 | Not Available | Negative | 4171747 - 4172760 | 37167.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
