Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter, dha1 family, arabinose polymer transporter | SAMN04488090_3316 | Not Available | Positive | 4149717 - 4150886 | 40705.3 |
| methylglyoxal synthase | SAMN04488090_3317 | Not Available | Negative | 4150980 - 4151447 | 17387.0 |
| abc-2 type transport system permease protein | SAMN04488090_3318 | Not Available | Negative | 4151507 - 4152613 | 41864.0 |
| abc-2 type transport system permease protein | SAMN04488090_3319 | Not Available | Negative | 4152618 - 4153718 | 40928.4 |
| abc-2 type transport system atp-binding protein | SAMN04488090_3320 | Not Available | Negative | 4153722 - 4154462 | 27393.0 |
| abc-type multidrug transport system, atpase component | SAMN04488090_3321 | Not Available | Negative | 4154459 - 4155352 | 32856.9 |
| hlyd family secretion protein | SAMN04488090_3322 | Not Available | Negative | 4155356 - 4156288 | 34205.1 |
| transcriptional regulator, tetr family | SAMN04488090_3323 | Not Available | Negative | 4156290 - 4156883 | 22778.9 |
| methane oxygenase pmoa | SAMN04488090_3324 | Not Available | Negative | 4157009 - 4158061 | 39383.8 |
| nicotinamide mononucleotide transporter | SAMN04488090_3325 | Not Available | Positive | 4158322 - 4158885 | 21432.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
