Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_3306 | Not Available | Positive | 4137090 - 4138823 | 67192.2 |
| hypothetical protein | SAMN04488090_3307 | Not Available | Negative | 4138920 - 4139909 | 36677.3 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | SAMN04488090_3308 | Not Available | Negative | 4140003 - 4141310 | 47491.3 |
| protein of unknown function | SAMN04488090_3309 | Not Available | Negative | 4141352 - 4142233 | 34049.4 |
| regulator of protease activity hflc, stomatin/prohibitin superfamily | SAMN04488090_3310 | Not Available | Positive | 4142396 - 4143247 | 30590.4 |
| hypothetical protein | SAMN04488090_3311 | Not Available | Positive | 4143225 - 4143422 | 7444.09 |
| multidrug resistance protein, mate family | SAMN04488090_3312 | Not Available | Positive | 4143725 - 4145128 | 50582.3 |
| amino acid/polyamine/organocation transporter, apc superfamily | SAMN04488090_3313 | Not Available | Positive | 4145183 - 4146631 | 51904.4 |
| peptidase family m1 | SAMN04488090_3314 | Not Available | Negative | 4146860 - 4148506 | 62324.9 |
| protein of unknown function | SAMN04488090_3315 | Not Available | Negative | 4148675 - 4149298 | 23730.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
