Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_0320 | Not Available | Negative | 419270 - 419725 | 16866.4 |
| cytochrome c | SAMN04488090_0321 | Not Available | Negative | 419736 - 420707 | 35620.4 |
| dna-binding transcriptional regulator, lysr family | SAMN04488090_0322 | Not Available | Negative | 420905 - 421795 | 33466.0 |
| two component transcriptional regulator, lyttr family | SAMN04488090_0323 | Not Available | Negative | 421900 - 422610 | 27282.3 |
| histidine kinase | SAMN04488090_0324 | Not Available | Negative | 422610 - 423671 | 41014.9 |
| hypothetical protein | SAMN04488090_0325 | Not Available | Positive | 423911 - 424360 | 17076.5 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_0326 | Not Available | Negative | 425069 - 426139 | 37899.1 |
| hypothetical protein | SAMN04488090_0327 | Not Available | Negative | 426210 - 430034 | 133505.0 |
| helix-turn-helix | SAMN04488090_0328 | Not Available | Negative | 430539 - 430916 | 14178.2 |
| his kinase a (phospho-acceptor) domain-containing protein | SAMN04488090_0329 | Not Available | Positive | 431356 - 435426 | 153061.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
