Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_3296 | Not Available | Positive | 4124407 - 4127607 | 112021.0 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_3297 | Not Available | Positive | 4127740 - 4128855 | 39302.6 |
| hypothetical protein | SAMN04488090_3298 | Not Available | Positive | 4129079 - 4130524 | 53576.5 |
| fkbp-type peptidyl-prolyl cis-trans isomerase fklb | SAMN04488090_3299 | Not Available | Positive | 4130706 - 4131461 | 27283.0 |
| carboxyl-terminal processing protease | SAMN04488090_3300 | Not Available | Positive | 4131532 - 4133679 | 80712.4 |
| nipsnap protein | SAMN04488090_3301 | Not Available | Positive | 4133857 - 4134549 | 26259.2 |
| gxxexxy protein | SAMN04488090_3302 | Not Available | Positive | 4134693 - 4135070 | 14098.5 |
| helix-turn-helix domain-containing protein | SAMN04488090_3303 | Not Available | Positive | 4135179 - 4135994 | 31247.1 |
| hypothetical protein | SAMN04488090_3304 | Not Available | Positive | 4136042 - 4136434 | 14212.2 |
| helix-turn-helix domain-containing protein | SAMN04488090_3305 | Not Available | Positive | 4136663 - 4137076 | 15784.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
