Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine lyase thih | SAMN04488090_3276 | Not Available | Negative | 4105966 - 4107087 | 42674.9 |
| thiazole-phosphate synthase | SAMN04488090_3277 | Not Available | Negative | 4107090 - 4107854 | 26896.7 |
| thiamine-phosphate diphosphorylase | SAMN04488090_3278 | Not Available | Negative | 4107832 - 4108458 | 22700.4 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | SAMN04488090_3279 | Not Available | Negative | 4108455 - 4109201 | 26491.7 |
| hydroxymethylpyrimidine synthase | SAMN04488090_3280 | Not Available | Negative | 4109198 - 4111057 | 69065.1 |
| sulfur carrier protein | SAMN04488090_3281 | Not Available | Negative | 4111059 - 4111262 | 7093.62 |
| lsu ribosomal protein l9p | SAMN04488090_3282 | Not Available | Negative | 4111607 - 4112050 | 16040.4 |
| small subunit ribosomal protein s18 | SAMN04488090_3283 | Not Available | Negative | 4112104 - 4112355 | 9667.91 |
| ssu ribosomal protein s6p | SAMN04488090_3284 | Not Available | Negative | 4112412 - 4112777 | 13834.5 |
| hypothetical protein | SAMN04488090_3285 | Not Available | Negative | 4113347 - 4114321 | 36476.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
