Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipocalin-like domain-containing protein | SAMN04488090_3266 | Not Available | Negative | 4096474 - 4096998 | 19557.9 |
| lipocalin-like domain-containing protein | SAMN04488090_3267 | Not Available | Negative | 4097178 - 4097699 | 19875.6 |
| peptidyl-dipeptidase dcp | SAMN04488090_3268 | Not Available | Negative | 4097845 - 4099986 | 80651.4 |
| hypothetical protein | SAMN04488090_3269 | Not Available | Positive | 4100100 - 4101137 | 40977.1 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | SAMN04488090_3270 | Not Available | Negative | 4101130 - 4102296 | 44177.1 |
| orotidine-5'-phosphate decarboxylase | SAMN04488090_3271 | Not Available | Negative | 4102289 - 4103119 | 30368.9 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN04488090_3272 | Not Available | Positive | 4103292 - 4103870 | 21594.6 |
| hypothetical protein | SAMN04488090_3273 | Not Available | Positive | 4103901 - 4104392 | 17789.6 |
| thiamine-phosphate pyrophosphorylase | SAMN04488090_3274 | Not Available | Positive | 4104389 - 4104952 | 20302.5 |
| adenylyltransferase and sulfurtransferase | SAMN04488090_3275 | Not Available | Negative | 4104920 - 4105969 | 37923.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
