Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxypepd_reg-like domain-containing protein | SAMN04488090_3236 | Not Available | Negative | 4058959 - 4061487 | 97152.9 |
| protease i | SAMN04488090_3237 | Not Available | Positive | 4061779 - 4062339 | 20582.3 |
| hypothetical protein | SAMN04488090_3238 | Not Available | Positive | 4062422 - 4062586 | 6147.87 |
| molybdopterin adenylyltransferase | SAMN04488090_3239 | Not Available | Negative | 4062657 - 4063199 | 19277.4 |
| hypothetical protein | SAMN04488090_3240 | Not Available | Negative | 4063183 - 4064778 | 59399.6 |
| methionyl-trna synthetase | SAMN04488090_3241 | Not Available | Negative | 4064887 - 4066929 | 76212.4 |
| cubico group peptidase, beta-lactamase class c family | SAMN04488090_3242 | Not Available | Positive | 4066976 - 4068259 | 47651.6 |
| nucleoside-diphosphate-sugar epimerase | SAMN04488090_3243 | Not Available | Positive | 4068341 - 4069357 | 37663.9 |
| putative lumazine-binding | SAMN04488090_3244 | Not Available | Positive | 4069427 - 4069927 | 18036.7 |
| hypothetical protein | SAMN04488090_3245 | Not Available | Positive | 4069952 - 4071211 | 45111.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
