Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase i | SAMN04488090_3226 | Not Available | Positive | 4049144 - 4051960 | 105911.0 |
| lipocalin-like domain | SAMN04488090_3227 | Not Available | Positive | 4052032 - 4052535 | 17668.8 |
| dihydrofolate reductase | SAMN04488090_3228 | Not Available | Positive | 4052708 - 4053691 | 36747.6 |
| dinb superfamily protein | SAMN04488090_3229 | Not Available | Positive | 4054114 - 4054602 | 19218.6 |
| hypothetical protein | SAMN04488090_3230 | Not Available | Positive | 4054691 - 4055143 | 17353.3 |
| glycosyl hydrolase family 76 | SAMN04488090_3231 | Not Available | Negative | 4055203 - 4056258 | 40646.6 |
| molybdate transport system regulatory protein | SAMN04488090_3232 | Not Available | Negative | 4056323 - 4056700 | 14232.1 |
| predicted arabinose efflux permease, mfs family | SAMN04488090_3233 | Not Available | Negative | 4056743 - 4057996 | 44875.3 |
| hypothetical protein | SAMN04488090_3234 | Not Available | Negative | 4058019 - 4058255 | 8781.55 |
| transcriptional regulator, tetr family | SAMN04488090_3235 | Not Available | Negative | 4058271 - 4058864 | 22940.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
