Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc-2 type transport system atp-binding protein | SAMN04488090_3216 | Not Available | Negative | 4041558 - 4042487 | 34963.4 |
| hypothetical protein | SAMN04488090_3217 | Not Available | Negative | 4042638 - 4043141 | 18281.0 |
| na+/h+-dicarboxylate symporter | SAMN04488090_3218 | Not Available | Positive | 4043312 - 4044580 | 45466.0 |
| hypothetical protein | SAMN04488090_3219 | Not Available | Negative | 4044744 - 4045061 | 11417.4 |
| 4a-hydroxytetrahydrobiopterin dehydratase | SAMN04488090_3220 | Not Available | Positive | 4045195 - 4045425 | 8936.63 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN04488090_3221 | Not Available | Positive | 4045439 - 4046113 | 24423.9 |
| protein of unknown function | SAMN04488090_3222 | Not Available | Positive | 4046148 - 4047332 | 45313.3 |
| myo-inositol-1(or 4)-monophosphatase | SAMN04488090_3223 | Not Available | Positive | 4047360 - 4048163 | 30051.6 |
| virus attachment protein p12 family protein | SAMN04488090_3224 | Not Available | Positive | 4048210 - 4048365 | 5414.75 |
| nad(p)h-dependent fmn reductase | SAMN04488090_3225 | Not Available | Negative | 4048502 - 4048999 | 18428.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
