Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna nucleotidyltransferase/poly(a) polymerase | SAMN04488090_3206 | Not Available | Negative | 4029670 - 4031100 | 53740.2 |
| l-threonylcarbamoyladenylate synthase | SAMN04488090_3207 | Not Available | Negative | 4031129 - 4031641 | 18178.9 |
| hypothetical protein | SAMN04488090_3208 | Not Available | Negative | 4031676 - 4033142 | 55806.2 |
| diacylglycerol kinase (atp) | SAMN04488090_3209 | Not Available | Negative | 4033393 - 4033785 | 14812.5 |
| uncharacterized membrane protein | SAMN04488090_3210 | Not Available | Negative | 4033786 - 4034424 | 24404.6 |
| protein of unknown function | SAMN04488090_3211 | Not Available | Negative | 4034396 - 4035802 | 52023.7 |
| transcriptional regulator | SAMN04488090_3212 | Not Available | Negative | 4035839 - 4036147 | 11511.8 |
| hypothetical protein | SAMN04488090_3213 | Not Available | Negative | 4036166 - 4036783 | 22736.2 |
| protein of unknown function | SAMN04488090_3214 | Not Available | Negative | 4037038 - 4040043 | 113518.0 |
| abc-2 type transport system permease protein | SAMN04488090_3215 | Not Available | Negative | 4040211 - 4041542 | 49130.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
