Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-mannanase | SAMN04488090_0310 | Not Available | Positive | 404273 - 405940 | 63321.0 |
| glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-n-acetylglucosamine synthase | SAMN04488090_0311 | Not Available | Negative | 405937 - 408831 | 109584.0 |
| glycosyl hydrolases family 2, tim barrel domain | SAMN04488090_0312 | Not Available | Negative | 408876 - 410135 | 48333.1 |
| hypothetical protein | SAMN04488090_0313 | Not Available | Negative | 410337 - 411086 | 27011.2 |
| transcriptional regulator, arac family | SAMN04488090_0314 | Not Available | Negative | 411313 - 412173 | 32379.5 |
| protein of unknown function | SAMN04488090_0315 | Not Available | Positive | 412571 - 413119 | 20426.6 |
| putative transcriptional regulator | SAMN04488090_0316 | Not Available | Positive | 413123 - 413332 | 7665.56 |
| ragb/susd domain-containing protein | SAMN04488090_0317 | Not Available | Negative | 413389 - 415077 | 62653.6 |
| iron complex outermembrane recepter protein | SAMN04488090_0318 | Not Available | Negative | 415088 - 418072 | 107568.0 |
| abc-type molybdate transport system, substrate-binding protein | SAMN04488090_0319 | Not Available | Negative | 418356 - 419219 | 32216.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
