Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_3136 | Not Available | Positive | 3954720 - 3954965 | 8729.34 |
| hypothetical protein | SAMN04488090_3137 | Not Available | Positive | 3954970 - 3955200 | 8582.5 |
| acetoin utilization deacetylase acuc | SAMN04488090_3138 | Not Available | Negative | 3955170 - 3956105 | 34938.1 |
| concanavalin a-like lectin/glucanases superfamily protein | SAMN04488090_3139 | Not Available | Positive | 3956245 - 3959703 | 132072.0 |
| tat (twin-arginine translocation) pathway signal sequence | SAMN04488090_3140 | Not Available | Positive | 3959707 - 3961152 | 54055.6 |
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN04488090_3141 | Not Available | Positive | 3961346 - 3961861 | 17874.7 |
| protein of unknown function | SAMN04488090_3142 | Not Available | Positive | 3961972 - 3962619 | 24560.5 |
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN04488090_3143 | Not Available | Positive | 3962668 - 3963225 | 19777.6 |
| uncaracterized surface protein containing fasciclin (fas1) repeats | SAMN04488090_3144 | Not Available | Positive | 3963325 - 3963852 | 18600.5 |
| molecular chaperone dnak | SAMN04488090_3145 | Not Available | Negative | 3963988 - 3965916 | 69207.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
