Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysophospholipase l1 | SAMN04488090_3126 | Not Available | Negative | 3944521 - 3945936 | 51832.2 |
| 5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase | SAMN04488090_3127 | Not Available | Negative | 3945952 - 3947295 | 48405.1 |
| protein of unknown function | SAMN04488090_3128 | Not Available | Positive | 3947486 - 3947974 | 18563.8 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | SAMN04488090_3129 | Not Available | Positive | 3948000 - 3948857 | 31695.2 |
| hypothetical protein | SAMN04488090_3130 | Not Available | Positive | 3948926 - 3949324 | 15179.2 |
| predicted rna-binding protein, contains pua-like domain | SAMN04488090_3131 | Not Available | Positive | 3949414 - 3949827 | 15668.9 |
| hypothetical protein | SAMN04488090_3132 | Not Available | Positive | 3949814 - 3951382 | 59275.3 |
| 23s rrna (cytosine1962-c5)-methyltransferase | SAMN04488090_3133 | Not Available | Positive | 3951549 - 3952430 | 33658.3 |
| two-component system, ompr family, copper resistance phosphate regulon response regulator cusr | SAMN04488090_3134 | Not Available | Positive | 3952443 - 3953126 | 25827.3 |
| signal transduction histidine kinase | SAMN04488090_3135 | Not Available | Positive | 3953157 - 3954518 | 51739.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
