Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alkylhydroperoxidase ahpd family core domain-containing protein | SAMN04488090_3116 | Not Available | Positive | 3931436 - 3931888 | 17136.5 |
| o-succinylbenzoic acid--coa ligase | SAMN04488090_3117 | Not Available | Positive | 3932102 - 3933139 | 38127.0 |
| hypothetical protein | SAMN04488090_3118 | Not Available | Positive | 3933193 - 3933969 | 29464.4 |
| dna-binding transcriptional regulator, xre-family hth domain | SAMN04488090_3119 | Not Available | Negative | 3933966 - 3934919 | 36426.2 |
| wd40-like beta propeller repeat | SAMN04488090_3120 | Not Available | Positive | 3935110 - 3937956 | 106866.0 |
| hypothetical protein | SAMN04488090_3121 | Not Available | Positive | 3938147 - 3939274 | 40925.6 |
| carboxypeptidase c (cathepsin a) | SAMN04488090_3122 | Not Available | Positive | 3939438 - 3940946 | 56397.0 |
| hypothetical protein | SAMN04488090_3123 | Not Available | Positive | 3941062 - 3941712 | 24315.6 |
| d-alanyl-lipoteichoic acid acyltransferase dltb, mboat superfamily | SAMN04488090_3124 | Not Available | Negative | 3941909 - 3943378 | 56987.0 |
| gdsl-like lipase/acylhydrolase | SAMN04488090_3125 | Not Available | Negative | 3943356 - 3944480 | 42029.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
