Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| subtilase family protein | SAMN04488090_3106 | Not Available | Positive | 3918657 - 3920276 | 59249.4 |
| transcriptional regulator, tetr family | SAMN04488090_3107 | Not Available | Negative | 3920326 - 3920907 | 22219.0 |
| protein of unknown function | SAMN04488090_3108 | Not Available | Negative | 3920934 - 3921740 | 30232.4 |
| maltose/moltooligosaccharide transporter | SAMN04488090_3109 | Not Available | Negative | 3921843 - 3923126 | 46582.4 |
| alpha amylase, catalytic domain | SAMN04488090_3110 | Not Available | Negative | 3923136 - 3924836 | 63744.0 |
| glycosidase | SAMN04488090_3111 | Not Available | Positive | 3924985 - 3926955 | 75058.0 |
| beta-phosphoglucomutase | SAMN04488090_3112 | Not Available | Positive | 3926979 - 3927620 | 23496.2 |
| maltose phosphorylase | SAMN04488090_3113 | Not Available | Positive | 3927622 - 3929925 | 87907.6 |
| ribosomal-protein-alanine n-acetyltransferase | SAMN04488090_3114 | Not Available | Positive | 3929984 - 3930532 | 21150.1 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN04488090_3115 | Not Available | Positive | 3930523 - 3931416 | 33555.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
