Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_3096 | Not Available | Positive | 3902000 - 3902422 | 15821.1 |
| ribose-phosphate pyrophosphokinase | SAMN04488090_3097 | Not Available | Positive | 3902549 - 3903490 | 34124.1 |
| lsu ribosomal protein l25p | SAMN04488090_3098 | Not Available | Positive | 3903520 - 3904074 | 20301.8 |
| hypothetical protein | SAMN04488090_3099 | Not Available | Positive | 3904203 - 3906071 | 70679.6 |
| k(+)-stimulated pyrophosphate-energized sodium pump | SAMN04488090_3100 | Not Available | Negative | 3906576 - 3908741 | 74187.1 |
| n-acetylglucosaminyl deacetylase, lmbe family | SAMN04488090_3101 | Not Available | Positive | 3908957 - 3911422 | 91148.0 |
| nucleotide-binding universal stress protein, uspa family | SAMN04488090_3102 | Not Available | Negative | 3911517 - 3912326 | 29356.3 |
| aconitase | SAMN04488090_3103 | Not Available | Negative | 3912502 - 3914769 | 80893.3 |
| dna topoisomerase i | SAMN04488090_3104 | Not Available | Positive | 3915234 - 3917741 | 93834.9 |
| nad-dependent deacetylase | SAMN04488090_3105 | Not Available | Positive | 3917779 - 3918495 | 26511.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
