Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_3086 | Not Available | Positive | 3892405 - 3893487 | 40219.2 |
| carboxylate-amine ligase | SAMN04488090_3087 | Not Available | Positive | 3893516 - 3894619 | 42619.3 |
| gmp synthase-glutamine amidotransferase | SAMN04488090_3088 | Not Available | Positive | 3894743 - 3895549 | 30595.6 |
| hypothetical protein | SAMN04488090_3089 | Not Available | Positive | 3895546 - 3896733 | 45002.6 |
| hypothetical protein | SAMN04488090_3090 | Not Available | Negative | 3896730 - 3897599 | 31971.2 |
| acetylornithine/succinyldiaminopimelate/ putresci ne aminotransferase | SAMN04488090_3091 | Not Available | Positive | 3897710 - 3898909 | 43459.7 |
| thioredoxin | SAMN04488090_3092 | Not Available | Negative | 3899225 - 3899548 | 11559.1 |
| tigr02453 family protein | SAMN04488090_3093 | Not Available | Negative | 3899691 - 3900371 | 26376.3 |
| tryptophanyl-trna synthetase | SAMN04488090_3094 | Not Available | Positive | 3900478 - 3901446 | 36423.7 |
| undecaprenyl-diphosphatase | SAMN04488090_3095 | Not Available | Positive | 3901449 - 3902003 | 20696.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
