Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine synthetase | SAMN04488090_3076 | Not Available | Negative | 3877590 - 3879797 | 82453.4 |
| glutamine synthetase | SAMN04488090_3077 | Not Available | Positive | 3880287 - 3881309 | 37774.5 |
| threonylcarbamoyladenosine trna methylthiotransferase mtab | SAMN04488090_3078 | Not Available | Positive | 3881527 - 3882846 | 49677.4 |
| ammonium transporter | SAMN04488090_3079 | Not Available | Negative | 3883240 - 3884580 | 47410.6 |
| putative beta-barrel porin-2, ompl-like. bbp2 | SAMN04488090_3080 | Not Available | Negative | 3884651 - 3885922 | 45778.6 |
| 4fe-4s dicluster domain-containing protein | SAMN04488090_3081 | Not Available | Negative | 3886320 - 3886667 | 12436.3 |
| acyl-coa reductase (luxc) | SAMN04488090_3082 | Not Available | Positive | 3886794 - 3887795 | 37168.9 |
| carboxypepd_reg-like domain-containing protein | SAMN04488090_3083 | Not Available | Negative | 3887972 - 3890545 | 98348.3 |
| enterochelin esterase | SAMN04488090_3084 | Not Available | Negative | 3890636 - 3891448 | 30842.2 |
| esterase/lipase superfamily enzyme | SAMN04488090_3085 | Not Available | Positive | 3891670 - 3892374 | 27393.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
