Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-glucuronate isomerase | SAMN04488090_3066 | Not Available | Positive | 3867979 - 3869403 | 55132.2 |
| hypothetical protein | SAMN04488090_3067 | Not Available | Negative | 3869532 - 3870536 | 37844.5 |
| gliding motility-associated protein gldc | SAMN04488090_3068 | Not Available | Negative | 3870539 - 3870892 | 13492.9 |
| protein of unknown function | SAMN04488090_3069 | Not Available | Negative | 3870964 - 3871725 | 27632.6 |
| competence/damage-inducible protein cina | SAMN04488090_3070 | Not Available | Positive | 3872003 - 3873256 | 45767.4 |
| 2-oxoglutarate dehydrogenase e2 component (dihydrolipoamide succinyltransferase) | SAMN04488090_3071 | Not Available | Positive | 3873294 - 3874607 | 47282.1 |
| stearoyl-coa desaturase (delta-9 desaturase) | SAMN04488090_3072 | Not Available | Negative | 3874678 - 3875454 | 30814.2 |
| protein of unknown function | SAMN04488090_3073 | Not Available | Negative | 3875574 - 3876230 | 24656.7 |
| 16s rrna (uracil1498-n3)-methyltransferase | SAMN04488090_3074 | Not Available | Negative | 3876227 - 3876949 | 27399.9 |
| hypothetical protein | SAMN04488090_3075 | Not Available | Negative | 3876952 - 3877512 | 21383.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
