Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN04488090_3056 | Not Available | Positive | 3859783 - 3860235 | 17001.2 |
| regulator of protease activity hflc, stomatin/prohibitin superfamily | SAMN04488090_3057 | Not Available | Negative | 3860273 - 3861208 | 34710.5 |
| gtp cyclohydrolase i | SAMN04488090_3058 | Not Available | Negative | 3861356 - 3862048 | 26177.4 |
| 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase | SAMN04488090_3059 | Not Available | Negative | 3862008 - 3862427 | 16557.6 |
| hypothetical protein | SAMN04488090_3060 | Not Available | Positive | 3862604 - 3863095 | 18490.7 |
| glucose/galactose transporter | SAMN04488090_3061 | Not Available | Positive | 3863128 - 3864432 | 47205.1 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | SAMN04488090_3062 | Not Available | Positive | 3864767 - 3866770 | 74384.0 |
| hypothetical protein | SAMN04488090_3063 | Not Available | Positive | 3866773 - 3866967 | 7767.77 |
| predicted dna-binding protein, mmcq/yjbr family | SAMN04488090_3064 | Not Available | Positive | 3866970 - 3867320 | 13359.1 |
| tetratricopeptide repeat-containing protein | SAMN04488090_3065 | Not Available | Positive | 3867327 - 3867878 | 21527.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
