Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cytophagaceae
Genus
Siphonobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cytophagaceae |
| Genus | Siphonobacter |
| Species | Siphonobacter aquaeclarae |
| Strain | strain DSM 21668 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative aerobe/anaerobe |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1418575 bp
Thymine Count
1407705 bp
Guanine Count
1683608 bp
Cytosine Count
1675647 bp
Genome Length
6189941 bp
Protein-coding Genes
4967 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cubico group peptidase, beta-lactamase class c family | SAMN04488090_3016 | Not Available | Positive | 3810652 - 3811836 | 44961.0 |
| hypothetical protein | SAMN04488090_3017 | Not Available | Negative | 3811871 - 3812302 | 16087.5 |
| fibronectin type iii domain-containing protein | SAMN04488090_3018 | Not Available | Negative | 3812299 - 3814239 | 72180.0 |
| tanfor domain-containing protein | SAMN04488090_3019 | Not Available | Negative | 3814256 - 3818524 | 153931.0 |
| hypothetical protein | SAMN04488090_3020 | Not Available | Negative | 3818508 - 3820154 | 59981.8 |
| por secretion system c-terminal sorting domain-containing protein | SAMN04488090_3021 | Not Available | Negative | 3820151 - 3822457 | 82478.5 |
| two component transcriptional regulator, luxr family | SAMN04488090_3022 | Not Available | Negative | 3822484 - 3823113 | 22798.7 |
| histidine kinase-, dna gyrase b-, and hsp90-like atpase | SAMN04488090_3023 | Not Available | Negative | 3823180 - 3825078 | 72043.0 |
| hypothetical protein | SAMN04488090_3024 | Not Available | Positive | 3825458 - 3825982 | 18573.3 |
| response regulator receiver domain-containing protein | SAMN04488090_3025 | Not Available | Negative | 3826061 - 3826468 | 14615.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
